Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  237 bits (605), Expect = 2e-67
 Identities = 124/273 (45%), Positives = 176/273 (64%), Gaps = 6/273 (2%)

Query: 3   LIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQS-VQGS---QQNVAVSIDIR 58
           L++VSG SG+GKSVAL+  EDL YYC DNLPV LL  F++S ++G+    Q +AV ID+R
Sbjct: 8   LMIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVR 67

Query: 59  NLPKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAI 118
           +      L Q      +   +  +LF +AS E LLKRY++TRR HPLS  Q   +L +AI
Sbjct: 68  SRSDLTQLAQWRQAAQEYGIEARLLFFEASDEALLKRYADTRRRHPLS--QLGLALPEAI 125

Query: 119 ELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTD 178
             E++L  PL+ QAD ++D+S  ++H+L   V           L ++F+SF +K G+P +
Sbjct: 126 TRERELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDRLSLLFESFAYKRGVPAE 185

Query: 179 ADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKN 238
           AD+VFD R LPNPHW+P+LRPLTG DA ++ +L+   +V+    QI    + WLP L  +
Sbjct: 186 ADFVFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRND 245

Query: 239 NRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLG 271
            RSY+TIA GCTGGKHRSVYL +++  +  + G
Sbjct: 246 TRSYVTIAFGCTGGKHRSVYLAERMARHAREQG 278