Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Uncharacterized P-loop ATPase protein UPF0042 from Pseudomonas syringae pv. syringae B728a

 Score =  256 bits (653), Expect = 5e-73
 Identities = 134/286 (46%), Positives = 191/286 (66%), Gaps = 7/286 (2%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQ----SVQGSQQNVAVSID 56
           MR+I+VSG+SG+GKS AL VLED G+YCVDNLP  LL    +    + + ++  +AVSID
Sbjct: 1   MRMIIVSGRSGSGKSTALDVLEDNGFYCVDNLPAGLLPELAERALINTELAEPLLAVSID 60

Query: 57  IRNLPKEPSLVQDVLDQLKQNN-DVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLA 115
            RNLP   +    +L +++  N    +L+LDA + TLLKR+SETRR HPLS +    SLA
Sbjct: 61  ARNLPSHLTRFPQMLSEVRLRNIQCDVLYLDADEATLLKRFSETRRRHPLSTADR--SLA 118

Query: 116 QAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGL 175
           +AI  E  LLGP+ + ADL +++++ +L++L + +++R+  +       + +SFGFK G+
Sbjct: 119 EAIRDETALLGPIIDLADLKINTTHLNLYQLRDALKLRLLNKPEPGTAFLIESFGFKRGM 178

Query: 176 PTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPML 235
           P DAD VFDVR LPNP+W+P+LR  +GL+ P+  +L    +V E+ Q I  +   WLP  
Sbjct: 179 PVDADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLSVQPDVEEMFQDIFAYLNKWLPRF 238

Query: 236 EKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
             +NRSY+TIAIGCTGG HRSVYLT++LG+   Q    VQ+RH  L
Sbjct: 239 AASNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDL 284