Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  325 bits (834), Expect = 5e-94
 Identities = 155/281 (55%), Positives = 215/281 (76%), Gaps = 2/281 (0%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL 60
           M+L++VSG+SG+GKSVALRVLEDLGYYCVDNLP+ L+   +  ++G+   VA+SIDIRN+
Sbjct: 1   MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNM 60

Query: 61  PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL 120
           P++   ++  L +L +  +++  FL++S + LLKRYSETRR+HPLS  +SK SL +AI+L
Sbjct: 61  PEQEKALEKELARLPEGVELTSFFLNSSDKVLLKRYSETRRLHPLS--RSKVSLQEAIKL 118

Query: 121 EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD 180
           E ++L P+    D  +D+SN +++EL++ VR  + GR  K+LV++F+SFGFK+G+PT+AD
Sbjct: 119 EGKMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKELVIIFESFGFKHGMPTEAD 178

Query: 181 YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR 240
           ++FD RFLPNPHWEP+LRPLTGLD P+K FLE    V +   QI+   E WLP LE+NNR
Sbjct: 179 FMFDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNR 238

Query: 241 SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
           SYLTIAIGCTGG+HRSVY+ +QL + FA   H+V+ RH  L
Sbjct: 239 SYLTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHREL 279