Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

 Score =  217 bits (552), Expect = 3e-61
 Identities = 117/284 (41%), Positives = 167/284 (58%), Gaps = 5/284 (1%)

Query: 2   RLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNLP 61
           R+IVV+G SGAG++  LR LED+GY  VDNLP+SL  A  Q      + + + ID R   
Sbjct: 55  RVIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLFEALTQGRWDQPRPLVLGIDTRTRG 114

Query: 62  KEPSLVQDVLDQLKQNN--DVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIE 119
              + V   +++L      DV +LF+D   E L++RY+ETRR HPL++ +    LA  I 
Sbjct: 115 FHAATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRRRHPLAVDRP---LADGIA 171

Query: 120 LEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDA 179
           LE+ L+ PLKE+A   LD+S     +L   +        R +L +   SFGF+ GLP +A
Sbjct: 172 LERALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAIFVSSFGFRNGLPREA 231

Query: 180 DYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNN 239
           D VFDVRFL NPH+EP LR +TGLD  + +++    +   L  ++       +P  EK  
Sbjct: 232 DLVFDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRVTALLALLVPRYEKEG 291

Query: 240 RSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSLEK 283
           +SYLTIAIGCTGGKHRSVY  ++L  +  + G +  +RH  L++
Sbjct: 292 KSYLTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRDLKE 335