Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., hypothetical protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  196 bits (499), Expect = 4e-55
 Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 22/293 (7%)

Query: 3   LIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSL----LTAFIQSVQGSQQNVAVSIDIR 58
           +I+V+G SGAGKS  L VLEDL Y+ VD LP SL    +T   +      Q + + +D+R
Sbjct: 8   VIIVTGLSGAGKSTVLNVLEDLRYFTVDGLPASLAPQMVTILNREALSHYQGLVLGMDLR 67

Query: 59  NLPKEPSLVQDVLDQLKQNNDV----SMLFLDASKETLLKRYSETRRIHPLSLSQSKPSL 114
               E + V+++   L++   +    +++F++A+   L +RY+ TRR HPL        L
Sbjct: 68  ----ESNFVRNLEKSLERLQGMGVRPAVVFIEATPAVLNRRYATTRRPHPLE--SEGMGL 121

Query: 115 AQAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMR---IEGRERKDLVMVFQSFGF 171
            QA+E E+  L P++E ADL++D+S+ S+H+L   ++ +   I+GR R   + +  +FGF
Sbjct: 122 EQALEQERLRLAPVRETADLVVDTSSYSIHDLRRVIQKKWSSIQGRIRSLRINIV-TFGF 180

Query: 172 KYGLPTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFL--EGHSEVMELKQQIQKFFE 229
           KYG+P DAD VFD+RFLPNP++ PDLRPL+GLD P+  ++   GH E    K  +  F  
Sbjct: 181 KYGVPADADLVFDLRFLPNPYFVPDLRPLSGLDEPVAKYVLEAGHGETFLAK--LLDFLH 238

Query: 230 YWLPMLEKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSLE 282
           + LP  E   R  LTIAIGCTGG+HRSV + + L     +  + V + H  +E
Sbjct: 239 FLLPQYEAEGRYRLTIAIGCTGGRHRSVSVAEALLRALKKSDYAVSIEHRHME 291