Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  320 bits (821), Expect = 2e-92
 Identities = 155/281 (55%), Positives = 214/281 (76%), Gaps = 2/281 (0%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL 60
           M+L++VSG+SG+GKSVALRVLEDLGYYCVDNLP+ L+ + ++ ++GS   VA+S+D+RNL
Sbjct: 1   MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL 60

Query: 61  PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL 120
           P++  ++   L  L +  +++  FL++S + LLKRYSETRR+HPLS  +S+ SL +AI+L
Sbjct: 61  PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLS--KSRVSLQEAIKL 118

Query: 121 EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD 180
           E +LL PL +Q D  +D+SN +++ELS+ VR  + G   K+LV+ F+SFGFK+G+PT+AD
Sbjct: 119 EGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEAD 178

Query: 181 YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR 240
           ++FDVRFLPNPHWEP+LRPLTGLD P+  FL     V +   QI+   E WLP LE+NNR
Sbjct: 179 FMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNR 238

Query: 241 SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
           SYLTIAIGCTGG+HRSVY+ +QL + F+   H+V  RH  L
Sbjct: 239 SYLTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHREL 279