Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., RNase adapter RapZ from Lysobacter sp. OAE881

 Score =  245 bits (626), Expect = 7e-70
 Identities = 133/287 (46%), Positives = 186/287 (64%), Gaps = 9/287 (3%)

Query: 3   LIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQ----GSQQNVAVSIDIR 58
           L++VSG SG+GKSVALR  EDLGY+CVDNLP  LL  F+ SV     G+   +AVSID+R
Sbjct: 9   LVIVSGMSGSGKSVALRTFEDLGYFCVDNLPADLLPQFVASVMRADDGAPAKMAVSIDVR 68

Query: 59  NLPKEPSLVQDVLDQL-KQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQA 117
           N   + S + + L  + K   D  ++F DA++  LLKRY++TRR HPLS      SLA A
Sbjct: 69  NRHSDLSNIPEWLSAVGKLGLDPRLVFFDANESALLKRYADTRRRHPLS--HLGLSLADA 126

Query: 118 IELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPT 177
           I LE+Q+L PL+  AD ++D+S  ++H+L   V           + ++F+SF ++ G+P 
Sbjct: 127 IALERQVLKPLRSIADAVVDTSTLNVHQLRRQVLTEFGIGGDTGMSLLFESFAYRRGVPP 186

Query: 178 DADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLE- 236
           DAD+VFD R LPNPHW+P LRPL+G DA I+ +LE  ++V    +QI+ F + WLP L  
Sbjct: 187 DADFVFDARALPNPHWDPVLRPLSGRDAAIREYLESQADVNLFFEQIRTFLDTWLPRLHV 246

Query: 237 KNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLG-HQVQLRHTSLE 282
            + RSY TIA GCTGG+HRSVYL ++  E+  + G  +V + H  L+
Sbjct: 247 DSTRSYATIAFGCTGGRHRSVYLAERFAEHAREQGWDEVAVHHRELD 293