Pairwise Alignments

Query, 148 a.a., PTS IIA-like nitrogen-regulatory protein PtsN from Vibrio cholerae E7946 ATCC 55056

Subject, 147 a.a., nitrogen regulatory IIA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (419), Expect = 2e-46
 Identities = 79/147 (53%), Positives = 113/147 (76%), Gaps = 2/147 (1%)

Query: 1   MQLSEVLSLDCTKSAVQCSSKKRALEIISEIAAL-HTGQNATELFECMLSREKMGSTGIG 59
           M+L  +L  +CT  A    SKK+ LE+IS++AA  +   ++  +FE +++REKMGSTGIG
Sbjct: 1   MELRTILRPECTTCATP-GSKKKVLELISDLAAAQYPTLSSQAIFESLVAREKMGSTGIG 59

Query: 60  NGIAIPHARMSDSENAVAVLLQCEEPIEFDSIDNRPVDLLFALLVPEDQCKEHLKTLACM 119
           NGIAIPH R++D    +A+L++CEEPI FD+ID +PVD+LFALLVP +QC++HL TL+CM
Sbjct: 60  NGIAIPHGRLTDITQPIAILIKCEEPIAFDAIDKQPVDILFALLVPANQCQQHLSTLSCM 119

Query: 120 AERLNDKQILKQLRNAASDQELYNIMV 146
           AE+L+DKQ+LKQLR    + ELY +++
Sbjct: 120 AEKLSDKQVLKQLRKTHDETELYQVII 146