Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  288 bits (738), Expect = 5e-83
 Identities = 139/239 (58%), Positives = 187/239 (78%)

Query: 3   ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
           +L A  L K YK+R+VV +  L +E+G++VGLLGPNGAGKTT FYMIVGLV  D G I +
Sbjct: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60

Query: 63  DDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLEDLL 122
           D  D++  PM++R+++G+GYLPQE S+FRKLSV DNI  VL+ R++L    ++ +L  LL
Sbjct: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120

Query: 123 EEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIEH 182
           EE  I H+    G +LSGGERRR EIARALAA P+ +LLDEPFAGVDPISV +I++I+ H
Sbjct: 121 EELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIH 180

Query: 183 LRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQFRL 241
           L++RG+GVLITDHNVRETL +C++AYI+++G ++A+G P  +LNN  V++VYLG+ FRL
Sbjct: 181 LKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239