Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., LptA, protein essential for LPS transport across the periplasm from Pseudomonas fluorescens FW300-N2E2

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)

Query: 21  LSLIACLLASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSININADKL 80
           LSL A  L S  A+AL  DR QP+ I +D  QLD K+   T+ GDV + QGS+ +  + +
Sbjct: 11  LSLGAAALGSASAWALPDDRNQPIRIQADDAQLDDKNGVATYKGDVIITQGSMKVTGNTV 70

Query: 81  IVIRNAENGKIEEIEGYGNVATFSQLTDEG--KTLYGEAKELYYKVRDDELVMINKA-ML 137
            + R  ++G I+ +   GN+A F QL   G  K + G    + Y    D +V+I++A ++
Sbjct: 71  TITR-TQSGDIDVVTSVGNLAYFEQLQTAGDTKPVQGYGVTIQYHASQDRVVLIDRAKVV 129

Query: 138 SQDDSEIRGSKIRYKISLQKLIAD-------SDGKGRVSTVLQPQ 175
            +D++  +G KI Y  + +   A        ++ + R+  V+QP+
Sbjct: 130 DKDNNVTQGEKIVYDTNKKLASAGRATGSKVTESRPRIDMVIQPK 174