Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., OstA-like protein, similar to lipopolysaccharide export system protein LptA from Phaeobacter inhibens DSM 17395

 Score = 48.9 bits (115), Expect = 4e-11
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 29  ASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSININA-DKLIVIRNAE 87
           AS    A+  D  QPV + +++  ++       F+GDV + QG + ++A D L++ +  E
Sbjct: 18  ASIAFGAVKADPSQPVEVTAETLDVNQADGSARFIGDVVIIQGVMRLSANDVLVIYKQDE 77

Query: 88  NGK--IEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDELVMINKAMLSQDDSEIR 145
            GK  +E +E  GNV   +           EA +  Y +    +VM    +LSQ    + 
Sbjct: 78  TGKTGVERLEASGNVILVNGPD------AAEADKAEYTIDSGTVVMTGNVLLSQSTGTLT 131

Query: 146 GSKIRYKISLQKLIADSDGKGRVSTVL 172
            +++   ++       +   GRV T+L
Sbjct: 132 SNRLVVDLT----TGTASLSGRVKTIL 154