Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., OstA family protein (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 2e-30
 Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 4/166 (2%)

Query: 16  MKRSHLSLIACL-LASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSIN 74
           MK + L L   L L S  AYA   D  Q V I + SQ+ D+K+N++ F G V++ QGSI 
Sbjct: 1   MKLNSLILAGLLPLVSVGAYAKVNDLLQEVKISAASQEADIKNNQIIFHGPVEVTQGSIK 60

Query: 75  INADKLIVIRNAEN-GKIEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDELVMIN 133
           I A +L      +N GKI  +   GN AT+SQ+ ++G+     AKE+ Y++    L +I 
Sbjct: 61  ILASELRAFSKEKNSGKI--LIATGNPATYSQVMEDGRPASASAKEIRYELSSRTLTLIG 118

Query: 134 KAMLSQDDSEIRGSKIRYKISLQKLIADSDGKGRVSTVLQPQAIQE 179
            A L Q+ S++ GS+IRY I  Q+LIA+S GK RV T++QP+  QE
Sbjct: 119 DATLEQEGSQVTGSQIRYNIEQQQLIAESTGKDRVITIIQPENYQE 164