Pairwise Alignments

Query, 187 a.a., LPS export ABC transporter periplasmic protein LptC from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 8/185 (4%)

Query: 2   SLSRIVYVLLLFIASWSLY-YLLGQEQDSKIQVAPNLELPMFSGENLENISYDEQGIRNY 60
           +L  ++  LL+ I  W++      Q+  +     P+++  +    N   + Y   G RNY
Sbjct: 9   ALLTLIAALLVAIGYWNIRPESFMQQPPAATAETPDVDFYVI---NSRTVQYQPDGKRNY 65

Query: 61  VITSIHLDHYAKSGNTLFKAPILKVYREGTLQEWEITARRGILSK--DQVLTLYDDVLAK 118
            +T+  L+H   S  +L   P L  YR GT   W + + RG +S   D+VL L D V  +
Sbjct: 66  ELTADKLEHIKASDVSLLTKPDLMSYR-GTELPWHVRSERGEVSAEGDEVL-LIDKVRVE 123

Query: 119 NLLPDSGFDTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHSAELYNQV 178
                     LTTS +++         ++ V +      T    MK    D    L + V
Sbjct: 124 RTDAKGRPTILTTSRLTVWPDKDYAETNQAVRIEAANGVTTATGMKAYMDDGRMLLLSNV 183

Query: 179 QGRYE 183
           +G++E
Sbjct: 184 RGQHE 188