Pairwise Alignments

Query, 332 a.a., calcium/sodium antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., CaCA family Na(+)/Ca(+) antiporter (RefSeq) from Shewanella loihica PV-4

 Score =  236 bits (602), Expect = 5e-67
 Identities = 130/311 (41%), Positives = 207/311 (66%), Gaps = 11/311 (3%)

Query: 21  LFIGLAILVWGADKLVFGSAALARNIGISPLVIGMTILAMGSSAPEMMVSATAALEGKTD 80
           L  GL IL+ GA+ LV G++ALA  +G++PL+IG+TI+A G+SAPE+ VS  +AL G + 
Sbjct: 7   LIAGLLILILGAESLVRGASALALKLGVTPLIIGLTIVAFGTSAPELAVSLKSALAGNSG 66

Query: 81  TAVGNVLGSNIANIALILGITAIVKPLSVGSAVLRRELPMMIGVTLIAGAILWDNHLGFY 140
            A+GNV+GSNIANI LILG+TA+V+P+ V S +++R++P+M+  +L+   ++ D  L   
Sbjct: 67  IALGNVVGSNIANIGLILGLTALVRPIGVQSMMVKRDIPLMLFASLLFWGLISDGSLSQL 126

Query: 141 EGILLIALFAAFILVMLQVSRKEKQNGDALLDEQESEIPVGVSNPKAAFWVVVGLILLPI 200
           +G LL ++  A++ +       +KQ  D    E +   P+      A   ++VG+ +L  
Sbjct: 127 DGALLCSMLIAYLGMNYLF---DKQQADTESMELKPLAPL-----LAVVLLLVGIAMLVG 178

Query: 201 GAGMLVDNAVVIAKYFGMSDLVIGLTIIAVGTSLPELAASLAGALKGEDDMAVGNIIGSN 260
           G  + VD AV +A+  GMS+L+IGLTIIA+GTS+PEL  SL  A +GE D+A+GN++GSN
Sbjct: 179 GGILFVDGAVALARQLGMSELLIGLTIIAIGTSMPELITSLVAARRGESDIAIGNLVGSN 238

Query: 261 VFNILAVMGLPGLLNPSLLSPEAMSRDFWVMLGVSLLLVGVALGKKRQITRLEGALLLCS 320
           +FNIL ++G+  +++P  ++      D  VM+ ++LLL+ +A    R + R EGALLL  
Sbjct: 239 LFNILGILGITAIIHP--ITASVPKLDMLVMVSLALLLLPLAWSGLR-VGRREGALLLLC 295

Query: 321 FIGYITYLLMN 331
           ++ Y+ YL+++
Sbjct: 296 YLVYLGYLILS 306



 Score =  108 bits (269), Expect = 2e-28
 Identities = 57/138 (41%), Positives = 94/138 (68%), Gaps = 3/138 (2%)

Query: 17  AVVFLFIGLAILVWGADKLVFGSAALARNIGISPLVIGMTILAMGSSAPEMMVSATAALE 76
           AVV L +G+A+LV G    V G+ ALAR +G+S L+IG+TI+A+G+S PE++ S  AA  
Sbjct: 165 AVVLLLVGIAMLVGGGILFVDGAVALARQLGMSELLIGLTIIAIGTSMPELITSLVAARR 224

Query: 77  GKTDTAVGNVLGSNIANIALILGITAIVKPLSVGSAVLRRELPMMIGVTLIAGAILWDN- 135
           G++D A+GN++GSN+ NI  ILGITAI+ P++  ++V + ++ +M+ + L+   + W   
Sbjct: 225 GESDIAIGNLVGSNLFNILGILGITAIIHPIT--ASVPKLDMLVMVSLALLLLPLAWSGL 282

Query: 136 HLGFYEGILLIALFAAFI 153
            +G  EG LL+  +  ++
Sbjct: 283 RVGRREGALLLLCYLVYL 300