Pairwise Alignments

Query, 332 a.a., calcium/sodium antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

 Score =  152 bits (384), Expect = 1e-41
 Identities = 85/263 (32%), Positives = 152/263 (57%), Gaps = 14/263 (5%)

Query: 13  MLIEAVVFLFIGLAILVWGADKLVFGSAALARNIGISPLVIGMTILAMGSSAPEMMVSAT 72
           ML   + ++  G  +L +G+D  + GS  +A++  +S  VIG TI+A G+S PE++ S+ 
Sbjct: 1   MLGYLISYMIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSG 60

Query: 73  AALEGKTDTAVGNVLGSNIANIALILGITAIVKPLSVGS-AVLRRELPMMIGVTLIAGAI 131
           AAL G    AVGN +GS IANI +ILGI+ ++ PL +   A+++     +I   L+   I
Sbjct: 61  AALSGYPGLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILL--VI 118

Query: 132 LWDNHLGFYEGILLIALFAAFILVMLQVSRKEKQNGDALLDEQESEIPVGVSNPKAAFWV 191
           L  N    ++G++L      +++  ++ S           +  + EI   ++  KA+ ++
Sbjct: 119 LGYNGFSRFDGLILFLFMITYVIYTIKTS-----------ESDDEEIISDLTTKKASIFI 167

Query: 192 VVGLILLPIGAGMLVDNAVVIAKYFGMSDLVIGLTIIAVGTSLPELAASLAGALKGEDDM 251
           VVGL+ + +G+ + ++ A  IA+YF + + +IG +++A GTSLPELA+S+A A +    +
Sbjct: 168 VVGLLAVILGSDLFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKRKLGSI 227

Query: 252 AVGNIIGSNVFNILAVMGLPGLL 274
            +GN+IGSN+ N    +    ++
Sbjct: 228 VLGNVIGSNIANTCIALSFSAMI 250



 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 3/140 (2%)

Query: 190 WVVVGLILLPIGAGMLVDNAVVIAKYFGMSDLVIGLTIIAVGTSLPELAASLAGALKGED 249
           +++ G ILL  G+   ++ +  +AK+F +S+ VIG TI+A GTSLPE+  S   AL G  
Sbjct: 8   YMIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGYP 67

Query: 250 DMAVGNIIGSNVFNILAVMGLPGLLNPSLLSPEAMSRDFWVMLGVSLLLVGVALGKKRQI 309
            +AVGN +GS + NI  ++G+  L+ P ++   A+ ++  + L  ++LL  V LG     
Sbjct: 68  GLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILL--VILG-YNGF 124

Query: 310 TRLEGALLLCSFIGYITYLL 329
           +R +G +L    I Y+ Y +
Sbjct: 125 SRFDGLILFLFMITYVIYTI 144