Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (309), Expect = 5e-33
 Identities = 73/225 (32%), Positives = 123/225 (54%), Gaps = 3/225 (1%)

Query: 32  RPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVAL 91
           RP+  R  P++V  +   G+ +  I+ +    +G V++  G  +L D+GA      +VA 
Sbjct: 156 RPRRWRMTPMVVH-IEQTGLDAAPIVALLTFLVGAVVAFLGATVLADFGASIFTVDLVAF 214

Query: 92  SLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVI 151
           S LRE G ++TA+L AGR  SA TA+IG MKA E++ ++  + +DP++ ++ PR  A ++
Sbjct: 215 SFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLDPVELLVIPRVLALLV 274

Query: 152 SMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTV 211
           ++P+L  + M  GI GG +V     GI    F + +Q+ + + Q      +K  +FAF +
Sbjct: 275 ALPMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGV-QHFLVGMVKAPIFAFLI 333

Query: 212 TWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMF 256
             +    G+    ++E +   TT +VV S   V+ LD V  AL F
Sbjct: 334 AAVGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAV-AALFF 377