Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., conserved hypothetical integral membrane protein from Pseudomonas stutzeri RCH2

 Score =  111 bits (277), Expect = 3e-29
 Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 16  ETFGRASLMLFGALVGRPQPIR-HFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYV 74
           E  G   L L   L+  P+P R     L   +   G+ ++ I+ +    +G V++  G  
Sbjct: 138 ELLGFTGLTLQTLLLTLPRPRRWRLTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLGAT 197

Query: 75  ILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMA 134
           +L D+GA      +V  S LRE G ++ A+L AGR+ SA  A+IG MK+ E++ ++  + 
Sbjct: 198 VLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIRTLG 257

Query: 135 VDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELG 194
           + P++ ++ PR  A +I++P+L  + M  GI GG +V V    I    F++ M   + + 
Sbjct: 258 LSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFTIMARDIAVS 317

Query: 195 QDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTAL 254
             +     K  VFAF +  I    G+    +++ +   TT +VV +   V+ LD  + AL
Sbjct: 318 HFL-VGLAKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLD-AIAAL 375

Query: 255 MF 256
            F
Sbjct: 376 FF 377