Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  123 bits (309), Expect = 4e-33
 Identities = 81/255 (31%), Positives = 139/255 (54%), Gaps = 14/255 (5%)

Query: 3   WVSSVGQRTLAVSETFGRASLMLF-GALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 61
           W+   GQ  L +    G  S  LF G + GR           +QL  +G  SL I +++ 
Sbjct: 30  WLRRSGQAILLL----GNTSFQLFTGKIDGRNT--------TQQLMFVGPASLPITLITA 77

Query: 62  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121
             IGM+ ++Q     + +GA +++G ++ L+L REL P++TA++ AGR GSA  AEIG M
Sbjct: 78  AVIGMIFTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTAVVVAGRVGSAFAAEIGTM 137

Query: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181
           + TEQ+ +L M+  +P++ ++ PR  A  I +P L+++ +  G+ GG ++  +  GI + 
Sbjct: 138 RVTEQIDALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVTGMMGGAVISSNVYGIANQ 197

Query: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241
            F+ ++Q  V    DI    +K +VF   +  I    G      ++G+  +TT  VV S 
Sbjct: 198 VFFESIQTFV-TPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRGGAKGVGESTTAAVVTSL 256

Query: 242 LAVLGLDFVLTALMF 256
           LA+   +F+++ +MF
Sbjct: 257 LAIFVSNFLMSWIMF 271