Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Protein of unknown function DUF140 from Synechococcus elongatus PCC 7942

 Score =  133 bits (335), Expect = 3e-36
 Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 12/255 (4%)

Query: 2   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 61
           RWV+    R L      G+  L LF A +  P   R       Q+ ++G  SL I +++G
Sbjct: 11  RWVN----RLLLALLLAGQVVLHLFRARID-PYNTRE------QMANVGPSSLLITLLTG 59

Query: 62  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121
           + +G V ++Q     +++GA   +G ++AL+L REL PV+T ++ AGR GSA  AEIG M
Sbjct: 60  VSVGAVFTIQVAREFINFGAGNIVGGILALALFRELAPVLTGVVVAGRIGSAFAAEIGTM 119

Query: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181
           + TEQ+ +L M+  DP+  ++ PR  A  + MP+L + F  +G+  G LV     GI   
Sbjct: 120 QVTEQIDALLMLRTDPVDYLVVPRTLACCLMMPILCLGFGLIGVTAGSLVAQSAYGIPVS 179

Query: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241
            F+  ++  +E   D+ +S IK V+F + V  I    G      + G+  +TT  VV + 
Sbjct: 180 VFFDGIRNFLE-PWDVVSSLIKAVIFGWVVAAIGTNWGLTTTGGARGVGESTTGAVVTAL 238

Query: 242 LAVLGLDFVLTALMF 256
           L +  LDF L+ LMF
Sbjct: 239 LVIFVLDFFLSQLMF 253