Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Protein of unknown function DUF140 (NCBI) from Rhodospirillum rubrum S1H

 Score =  128 bits (321), Expect = 1e-34
 Identities = 79/261 (30%), Positives = 143/261 (54%), Gaps = 8/261 (3%)

Query: 1   MRWVSSVGQRTLAVSETFGRASLM----LFGALVGR--PQPIRHFPLLVRQLYSIGVQSL 54
           ++ V  +GQ  +A     G+ASL+    L+  +VGR   QP+R    +V Q   +G+++L
Sbjct: 15  LKAVERLGQGVIAGVAEIGQASLLGAESLYWLVVGRFRGQPVR-LGAIVEQAMEMGIRAL 73

Query: 55  AIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSAL 114
            I++V    IGM+L++QG   L  +GAE  +   VA S++RE  P++T +L AGR+GSA+
Sbjct: 74  PIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVAFSVVREFAPLITGILVAGRSGSAI 133

Query: 115 TAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVD 174
            A +G M   +++ +L +M + P++ ++AP   A ++ +PL+  + M V + G  L    
Sbjct: 134 AARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAALVMVPLMTFLGMLVALLGASLTVRI 193

Query: 175 WKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATT 234
             G+   +F+      + L  D+ +   K  +FA  +  + + NG      +EG+ + TT
Sbjct: 194 DLGMSLSAFFHQTLDILRL-IDLTHGLGKSALFALQIVLVGVVNGVSVSGGAEGVGKMTT 252

Query: 235 RTVVHSSLAVLGLDFVLTALM 255
           R+VV +  A++  D V   ++
Sbjct: 253 RSVVQAISAIIVTDMVFAFIL 273