Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., Protein of unknown function DUF140 (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (385), Expect = 5e-42
 Identities = 89/257 (34%), Positives = 148/257 (57%), Gaps = 3/257 (1%)

Query: 1   MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLV-RQLYSIGVQSLAIIIV 59
           M +++ +G+  L      GR S+    AL    +P   FP L+ RQL  IG  SL ++ +
Sbjct: 1   MNFLAIIGRVFLTFLRHVGRLSVFTGTALSHCVRP-PFFPRLIGRQLVEIGYYSLPVVGL 59

Query: 60  SGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 119
           + +F GMVLSLQ +     + AE +   +V LS+ RELGPV+  L+ AGR G+A+ AEIG
Sbjct: 60  TAIFTGMVLSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAGLMVAGRIGAAMAAEIG 119

Query: 120 LMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGID 179
            MK TEQ+ +L  +A +P K ++ PR  AGV  +P+L +    +G++GG L+GV   G +
Sbjct: 120 TMKVTEQIDALTTLATNPYKYLVVPRLIAGVTMLPILVLTADIIGVFGGYLIGVYKLGFN 179

Query: 180 HGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVH 239
             ++ ++    +E   D+ +  +K  VF F +  +  ++G  +   ++G+  ATT  VV 
Sbjct: 180 PSNYIASTWEFLE-PMDVISGLVKASVFGFIIALMGCYHGSQSKGGAQGVGAATTNAVVS 238

Query: 240 SSLAVLGLDFVLTALMF 256
           +S+ +L  ++++T L F
Sbjct: 239 ASILILVCNYMITELFF 255