Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., conserved hypothetical integral membrane protein from Phaeobacter inhibens DSM 17395

 Score =  126 bits (316), Expect = 5e-34
 Identities = 77/253 (30%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 4   VSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLF 63
           ++ +GQ  LA     GR +L          +P  +   L+  L  +G  SL ++ ++ +F
Sbjct: 13  LARLGQMVLAGLGAVGRVTLFGLSTFSHMLRPPYYPRELLNALLQVGWLSLPVVGLTAIF 72

Query: 64  IGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 123
            G  L+LQ Y     + AE  + Q+VA+ ++RELGPV+  L+ A R  S++ AEI  MK 
Sbjct: 73  TGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132

Query: 124 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 183
           TEQ+ +L  ++  P+K ++APR  A +I++P+L  +   +GI GG +V     G +  ++
Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192

Query: 184 WSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 243
                  +EL +DI +S +K   F      +  + G  +   ++G+ RAT  +V  +++ 
Sbjct: 193 LKNTVDFLEL-RDIVSSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVL 251

Query: 244 VLGLDFVLTALMF 256
           +L  +FVLT + F
Sbjct: 252 ILAANFVLTGIFF 264