Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Conserved integral membrane protein YrbE4A. Possible ABC transporter. from Mycobacterium tuberculosis H37Rv

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 54/223 (24%), Positives = 113/223 (50%), Gaps = 4/223 (1%)

Query: 32  RPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVAL 91
           RP   R F   + Q + +   SL   ++  +   ++++    ++L + GA    G   A 
Sbjct: 29  RPFQFREF---LDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGTAF 85

Query: 92  SLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVI 151
             + +LGPVVT L+ AG   +A+ A++G     E++ ++ ++ +DP++R++ PR  A  +
Sbjct: 86  GTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTL 145

Query: 152 SMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTV 211
              LL  +  A+G+ GG    V  +G++ G+F + +     L +++  + IK ++F    
Sbjct: 146 VALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGL-RELILAEIKALLFGVMA 204

Query: 212 TWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTAL 254
             +  + G       +G+  A   TVV++ + +  ++ V+TA+
Sbjct: 205 GLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247