Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score =  114 bits (285), Expect = 3e-30
 Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 3/225 (1%)

Query: 33  PQPIR-HFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVAL 91
           P+P R      V  ++  G+ +L I+ +    +G V++  G  +L D+GA      +VA 
Sbjct: 161 PRPWRWRMTPFVAAVHDTGLNALPIVALLTFLVGAVVAFLGATVLDDFGATIYTVNLVAF 220

Query: 92  SLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVI 151
           S LRE G ++ A+L AGR  SA TA IG MK  E+L ++  + ++P++ ++ PR  A ++
Sbjct: 221 SFLREFGVLLAAILLAGRTASAFTAHIGAMKVNEELDAIRTLGLNPIELLVLPRVMAMMV 280

Query: 152 SMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTV 211
           S+P+L  + M  G+ GG +V      I    F + ++  + L Q      +K  +FAF +
Sbjct: 281 SLPILTFVGMISGMVGGAMVCALVLDITPTQFMAIVERDIAL-QHFVVGIVKAPIFAFLI 339

Query: 212 TWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMF 256
             I    G+    +++ +   TT +VV S   V+ LD +  AL F
Sbjct: 340 AVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLDSI-AALFF 383