Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  177 bits (450), Expect = 2e-49
 Identities = 94/225 (41%), Positives = 149/225 (66%), Gaps = 8/225 (3%)

Query: 37  RHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRE 96
           +  P +V Q+Y IG +SL +I++ G+F GMVL LQGY  LV +G+E  LG  VAL+L+RE
Sbjct: 44  KQLPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRE 103

Query: 97  LGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLL 156
           LGPV+TA++  GRAGS++ AEIG+M+ T+Q+ +L++M ++P+  +++PR  A +++ PLL
Sbjct: 104 LGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMGYLVSPRIAASLVAFPLL 163

Query: 157 AMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIAL 216
             +F  +GI GG + GV   GI+ G ++  +  SVEL  D+    +K ++FA  V+ ++ 
Sbjct: 164 TALFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELA-DVTGGFMKSLLFALIVSTVSC 222

Query: 217 FNGY------DAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALM 255
           + GY      D +   EG+S +TT  VV S + VL  D+VLT+ +
Sbjct: 223 YQGYFTHMRRDGM-GPEGVSNSTTSAVVMSCVLVLVADYVLTSFL 266