Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., ABC transporter permease protein from Caulobacter crescentus NA1000

 Score =  112 bits (279), Expect = 1e-29
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 8/235 (3%)

Query: 23  LMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAE 82
           L+  G  +  P  IR  P+ V      G+ ++ II  +  FIG V++L G  +L D+GA+
Sbjct: 136 LVALGRSIVSPHRIRWAPI-VALCERAGLDAMPIIATTTFFIGAVVALLGANMLTDFGAQ 194

Query: 83  TSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVI 142
               +++ +S++RE   ++TA+L AGR+ S+  AEIG MK  +++ ++++M VDP + ++
Sbjct: 195 VYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEIDAMQVMGVDPYEALV 254

Query: 143 APRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQD---IGN 199
            PRF A ++++PLL  +    G+ GG L  V W  +D    +   +    +G     IG 
Sbjct: 255 LPRFAALLLTIPLLTFVATIAGLAGGIL--VVWSVLDLSPTFFLQRIVDYVGATHFWIGL 312

Query: 200 STIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTAL 254
           S  K  V A  +  I    G +     E + R  T  VVH+  A++ +D V   +
Sbjct: 313 S--KAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILIDAVFALI 365