Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  353 bits (905), Expect = e-102
 Identities = 182/254 (71%), Positives = 212/254 (83%)

Query: 4   VSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLF 63
           ++ +G+  + +   FGRA LML+GA+   P+  + FPLLVRQ+Y +GVQS+ II+VSGLF
Sbjct: 7   IADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGLF 66

Query: 64  IGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 123
           IGMVL+LQGY ILV +G E SLG MVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK+
Sbjct: 67  IGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKS 126

Query: 124 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 183
           TEQLSSLEMMA+DPL+++IAPRFWAGVISMPLLA++F AVGI+GG LVGV+WKGID G+F
Sbjct: 127 TEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGAF 186

Query: 184 WSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 243
           WS +QASVE  QDI N  IK  VFA  VTWIAL+ GY  +P  EGISRATT TVV SSLA
Sbjct: 187 WSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSLA 246

Query: 244 VLGLDFVLTALMFG 257
           VL LDF+LTALMFG
Sbjct: 247 VLALDFLLTALMFG 260