Pairwise Alignments

Query, 129 a.a., RidA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 127 a.a., putative endoribonuclease L-PSP (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (258), Expect = 6e-28
 Identities = 54/123 (43%), Positives = 82/123 (66%), Gaps = 5/123 (4%)

Query: 4   VLHTDAAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEIPAD-IAAQARQSLDNVKAVVE 62
           ++ TD AP AIG Y Q V +G+ V  SGQIP+NP T ++ +D   AQ  Q  DN+ AV E
Sbjct: 6   IIATDKAPQAIGTYSQAVKVGSTVYLSGQIPLNPETMQMVSDEFEAQVVQVFDNLTAVCE 65

Query: 63  ASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVGIEI 122
           A+G ++ DIVK+ +F+ DL +F TVN++ G +F++     YPAR+ + V +LPKD  +E+
Sbjct: 66  AAGGSLKDIVKLNIFMTDLANFATVNEIMGRYFEQ----PYPARAAIGVKQLPKDSLVEM 121

Query: 123 EAI 125
           + +
Sbjct: 122 DGV 124