Pairwise Alignments

Query, 129 a.a., RidA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 128 a.a., endoribonuclease L-PSP, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.4 bits (246), Expect = 2e-26
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 5/127 (3%)

Query: 1   MTKVLHTDAAPAAIGPYIQGVDLGNMVLTSGQIPV-NPATGEIPADIAAQARQSLDNVKA 59
           M  ++H + AP AIGPY  G   GN++ TSGQ+PV     G +   I+ Q+ Q L+N+K 
Sbjct: 2   MKSIIHAERAPTAIGPYSHGTRYGNLIFTSGQLPVCKDKGGVVDGGISEQSVQCLENLKY 61

Query: 60  VVEASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVG 119
           V+EA G ++  ++K T ++ +++DF   N+VY  +F        PARSC  V  LP  V 
Sbjct: 62  VLEAGGGSLDTVLKTTCYLSEISDFAAFNEVYKTYFK----TDCPARSCFAVKDLPLGVK 117

Query: 120 IEIEAIA 126
           +EIEAIA
Sbjct: 118 VEIEAIA 124