Pairwise Alignments

Query, 129 a.a., RidA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 127 a.a., endoribonuclease, L-PSP family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 88.2 bits (217), Expect = 4e-23
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 5/117 (4%)

Query: 10  APAAIGPYIQGVDLGNMVLTSGQIPVNPATGE-IPADIAAQARQSLDNVKAVVEASGLTV 68
           APA + PY  G+  G+ +  SGQ+P++ ATG  I  DI  + RQ+L N++AVV A+G  +
Sbjct: 12  APAPVAPYSPGMVCGSFLFVSGQLPLDAATGVLIEGDIRERTRQALRNMQAVVRAAGCEL 71

Query: 69  GDIVKMTVFVKDLNDFGTVNQVYGAFFDEHKVAHYPARSCVEVARLPKDVGIEIEAI 125
              V++ +++ D+NDF  VN+VY  FF       YPAR+ ++ A LP    I I+ I
Sbjct: 72  SCAVRVNIYLADMNDFAAVNEVYKTFF----CKPYPARTAIQAAALPLGSDILIDGI 124