Pairwise Alignments

Query, 309 a.a., aspartate carbamoyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., aspartate carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  211 bits (536), Expect = 3e-59
 Identities = 120/320 (37%), Positives = 188/320 (58%), Gaps = 21/320 (6%)

Query: 3   NSLYQKHIISIAELSRAELELIVKTAGQLKA----QPNPELIKHKVVASCFFEPSTRTRL 58
           N     HI+S+ +L    ++ I   A ++      +   ++++  ++ + FFEPSTRTR+
Sbjct: 2   NQFEGSHILSVNQLDLDSIQTIFNVAHRMMPYALREKRTKVLEGAILGNLFFEPSTRTRV 61

Query: 59  SFETAIQRIGGSVIGFDNGGNTSLAKKGETLADSVRVISSYVDAFVMRHPQEGAARLASE 118
           SF  A   +GG V       ++SL+K GE+L D+ RV+S+Y D   MRHP   + +   E
Sbjct: 62  SFGCAFNLLGGHVRETTGMASSSLSK-GESLYDTARVLSTYSDVIAMRHPDSYSVK---E 117

Query: 119 FSNG--VPVINAGDGSNQHPSQTLLDLYSIFETQGR----LDNLDVAFVGDLKYGRTVHS 172
           F+ G  VPVIN GDGSN+HP+Q LLDL++I +  G     +D + +A VGDLK+GRTVHS
Sbjct: 118 FAEGSRVPVINGGDGSNEHPTQALLDLFTIQKELGHASRGIDGMHIAMVGDLKFGRTVHS 177

Query: 173 LAQALAKFDNNRFYFVAPEALAMPDYICEELDEAGVKYQVFSDMESVIPELDILYMTRVQ 232
           L++ L  + N  F  ++P  LAMPDY+  +++ AG   ++   +E  + + DILY+TR+Q
Sbjct: 178 LSRLLCMYKNISFTLISPTELAMPDYVISDIENAGHSIKITDQLEGHLDKADILYLTRIQ 237

Query: 233 KERFDESEYAH-IKSAYILT-AAHLSDARSNLKVLHPLPR-----VDEITTDVDKTPHAY 285
           +ERF   E A+  +  + L  + +    +SN  ++HPLPR      +E+  D++  P+  
Sbjct: 238 EERFPSQEEANKYRGKFRLNRSIYTQHCKSNTVIMHPLPRDSRAQANELDNDLNSHPNLA 297

Query: 286 YFEQVENGVYAREALLALVL 305
            F Q +NG+  R AL AL L
Sbjct: 298 IFRQADNGLLIRMALFALTL 317