Pairwise Alignments

Query, 309 a.a., aspartate carbamoyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., aspartate carbamoyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  142 bits (359), Expect = 8e-39
 Identities = 110/316 (34%), Positives = 165/316 (52%), Gaps = 29/316 (9%)

Query: 4   SLYQKHIISIAELSRAELELIVKTAGQ---LKAQPNP--ELIKHKVVASCFFEPSTRTRL 58
           +L  +H++ I  L+  E+  ++  A +   L  +P+   + +      + FFE STRT+ 
Sbjct: 2   TLRARHLLGIEHLAPDEIVTLLDLADRYADLNRRPDKHGDALDGLTQINMFFENSTRTQA 61

Query: 59  SFETAIQRIGGSVIGFDNGGNTSLAKKGETLADSVRVISS-YVDAFVMRHPQEGAARLAS 117
           SFE A +R+G  V+  +     S  KKGETL D+   +++ + D  V+RHP  GA  L +
Sbjct: 62  SFEIAGKRLGADVMNMEV--RASSIKKGETLIDTAMTLNAMHPDLLVVRHPHSGAVNLLA 119

Query: 118 EFSNGVPVINAGDGSNQHPSQTLLDLYSIFETQGRLDNLDVAFVGDLKYGRTVHSLAQAL 177
           E  N   V+NAGDG ++HP+Q LLD  +I   +G+L  L+VA  GD+ + R   S    L
Sbjct: 120 EKVN-CAVLNAGDGRHEHPTQALLDALTIRRAKGKLHRLNVAICGDIAHSRVARSNILLL 178

Query: 178 AKFDNNRFYFVAPEALAMPDYICEELDEAGVKYQVFSDMESVIPELDILYMTRVQKERFD 237
            K + NR   V P  L MP     E+ E GV  +V+ DM++ +  +D++ M R+QKER D
Sbjct: 179 GKME-NRIRLVGPRTL-MP----AEIAELGV--EVYEDMKAGLDGVDVVMMLRLQKERMD 230

Query: 238 ------ESEYAHIKSAYILTAAHLSDARSNLKVLHPLPRVDEITTD---VDKTPHAYYFE 288
                 E EY H    Y L A  L+ A+ +  V+HP P    +  D    D    +   E
Sbjct: 231 GGFIPSEREYYH---RYGLDAEKLAYAKPDAIVMHPGPMNRGVEIDGTLADDINRSVIQE 287

Query: 289 QVENGVYAREALLALV 304
           QVE GV  R A + L+
Sbjct: 288 QVEMGVAVRMAAMDLL 303