Pairwise Alignments

Query, 458 a.a., ribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Nucleotide binding protein, PINc from Synechococcus elongatus PCC 7942

 Score =  233 bits (593), Expect = 1e-65
 Identities = 159/461 (34%), Positives = 245/461 (53%), Gaps = 36/461 (7%)

Query: 6   RKLFVLDTNILLHEPLAIYSFKEHDVVIPMTVLEELDRIKDSKRDVARDARVAIRALEHL 65
           +K +VLDTN+LLH+P+A++ F+++D+VIP+TV+EE+DR K    +  R+AR   R L+  
Sbjct: 2   KKTYVLDTNVLLHDPMALFRFEDNDLVIPITVIEEIDRFKKDLNERGRNARQISRLLDGF 61

Query: 66  FHDATPEEITEGIPLSKQEGATGTISILADYELDETVKAFTDKEGDNRILNAVLYLQAQR 125
               +   + EGI L    G    + +L    L++          DN IL   L LQ Q+
Sbjct: 62  ---RSKGHLIEGITLD--HGGKLRVVMLEKTFLEQLPSGLIANANDNAILAVALALQ-QQ 115

Query: 126 TPRAVVLVTKDINMRLRAKGAGVLYVEDYRTDQL-IDDIQYLTKGFQTRPGSFW----DS 180
             +  +LVTKD N+R++A   G L  EDY +D++   ++   T      P        + 
Sbjct: 116 NGQPTILVTKDTNLRIKADATG-LCAEDYESDKIDFSELYSGTAEVYLAPDQLQVFRREG 174

Query: 181 VEDVASYTLGGKTFHKLDRAPFDPTFLNQYVIDEDSDFAARVESIDGDKLTLRDLSRERM 240
             D++      +    +D      T L +Y   +       V  I   K+    +SR   
Sbjct: 175 GLDLSGEFFPNQALTLVDETNLSHTLLGRYRASD----RRVVPLIQPPKM---GISR--- 224

Query: 241 MHRKAWGITPKNIYQGMALDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTVERKMFDK 300
                  I  +N  Q  ALD LLD +I LV L G AG+GKTLLA+AA L +  + + F +
Sbjct: 225 -------IHARNREQQFALDLLLDDNIQLVTLVGKAGTGKTLLAVAAGLHKVADERHFSR 277

Query: 301 IIVTRNTPDIGESIGFLPGTEEEKMMPWLASVTDTLE-----ALHKNDHCTDGSLKY--I 353
           ++V+R    +G  +GFLPG  +EK+ PW+  + D L+     A +  D  ++    Y  +
Sbjct: 278 LLVSRPIFPMGRDLGFLPGDLQEKLAPWMQPIIDNLDFILGGANNNGDRPSNKQQNYQDL 337

Query: 354 CDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCSGNLAQID 413
                +Q + + ++RGRSI   F+++DE QNLT  +IKTI+TR GEGTKIV +G+  QID
Sbjct: 338 MGMNLLQIEPLTYIRGRSIPRQFMIVDEAQNLTPHEIKTILTRAGEGTKIVLTGDAYQID 397

Query: 414 SHYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFA 454
           + Y+   ++GLTY+VE+FKN   + +I L    RS LAE +
Sbjct: 398 NPYVDASSNGLTYVVEKFKNEAIAGHITLERGERSPLAELS 438