Pairwise Alignments

Query, 458 a.a., ribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., PhoH family protein (RefSeq) from Shewanella loihica PV-4

 Score =  622 bits (1603), Expect = 0.0
 Identities = 321/464 (69%), Positives = 374/464 (80%), Gaps = 6/464 (1%)

Query: 1   MGDTDRKLFVLDTNILLHEPLAIYSFKEHDVVIPMTVLEELDRIKDSKRDVARDARVAIR 60
           M   D+KLFVLDTN+LLHEPLAIYSFKEHDVV+PMTVLEELD+IKD KRDV+RDARVAIR
Sbjct: 1   MEQDDKKLFVLDTNVLLHEPLAIYSFKEHDVVVPMTVLEELDQIKDRKRDVSRDARVAIR 60

Query: 61  ALEHLFH-DATPEEITEGIPLSKQEG---ATGTISILADYELDETVKAFTDKEGDNRILN 116
           ALE +     TPEEI  G+PL K+EG   A G++SI  D++L+ T  +      DNRI+N
Sbjct: 61  ALEDILGGQTTPEEIVSGVPLPKREGHGDAVGSLSIFPDHQLEFTQASLPGDNNDNRIIN 120

Query: 117 AVLYLQAQRTPRAVVLVTKDINMRLRAKGAGVLYVEDYRTDQLIDDIQYLTKGFQTRPGS 176
             L+LQ Q  PR VVLVTKDINMRL+AKGAG+  VEDYRTDQLIDDI++LTKGF    G 
Sbjct: 121 TALHLQNQFAPRHVVLVTKDINMRLKAKGAGINLVEDYRTDQLIDDIRFLTKGFHQFEGD 180

Query: 177 FWDSVEDVASYTLGGKTFHKLD--RAPFDPTFLNQYVIDEDSDFAARVESIDGDKLTLRD 234
           FW   E V + T G  T H++       +  + NQY+IDEDS+F  RV S + ++L + D
Sbjct: 181 FWARKEHVNTETQGRHTVHRVPVKEVGEENFYTNQYLIDEDSNFCGRVLSNNDEELEILD 240

Query: 235 LSRERMMHRKAWGITPKNIYQGMALDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTVE 294
           L R+R+++  AWGI PKN+YQGMA+ ALLDPDIDLVILTG AG GKTLLAMAAALE  VE
Sbjct: 241 LGRDRLLNLDAWGIKPKNVYQGMAMQALLDPDIDLVILTGPAGCGKTLLAMAAALEMVVE 300

Query: 295 RKMFDKIIVTRNTPDIGESIGFLPGTEEEKMMPWLASVTDTLEALHKNDHCTDGSLKYIC 354
           R ++DK+IVTRNTP+I ESIGFLPGTEEEKM PWLA++TDTLE LHK+D    GS+ YI 
Sbjct: 301 RGLYDKVIVTRNTPEIAESIGFLPGTEEEKMAPWLAAITDTLEVLHKHDVNPSGSMNYIM 360

Query: 355 DKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCSGNLAQIDS 414
           DKANIQFKSINFMRGRSIQN+ VLLDECQNLTASQIKT+ITR GEGTK++CSGNLAQIDS
Sbjct: 361 DKANIQFKSINFMRGRSIQNSVVLLDECQNLTASQIKTMITRMGEGTKLICSGNLAQIDS 420

Query: 415 HYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENL 458
           +YLT VTSGLTY+VERFKNF+GSANI+LNGVVRSRLAEFAEENL
Sbjct: 421 NYLTAVTSGLTYIVERFKNFDGSANIYLNGVVRSRLAEFAEENL 464