Pairwise Alignments

Query, 458 a.a., ribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., PhoH family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  615 bits (1585), Expect = e-180
 Identities = 319/464 (68%), Positives = 370/464 (79%), Gaps = 6/464 (1%)

Query: 1   MGDTDRKLFVLDTNILLHEPLAIYSFKEHDVVIPMTVLEELDRIKDSKRDVARDARVAIR 60
           M   DRKLFVLDTN+LLHEPLAIYSFKEHDVVIPMTVLEELD+IKD K DV+RDARVAIR
Sbjct: 1   MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIR 60

Query: 61  ALEH-LFHDATPEEITEGIPLSKQEG---ATGTISILADYELDETVKAFTDKEGDNRILN 116
           ALE  L  D TPE+I  G+PL  +EG   A G++SI  D+ +D T+ A      DNRI+N
Sbjct: 61  ALEDTLGGDTTPEQIINGVPLPSREGHADAIGSLSIFPDHLVDFTLGALPGDGNDNRIIN 120

Query: 117 AVLYLQAQRTPRAVVLVTKDINMRLRAKGAGVLYVEDYRTDQLIDDIQYLTKGFQTRPGS 176
             L+LQ    PR VVLVTKDINMRL+AKGAG+  VEDYRTDQLIDDI++L+KGF    G+
Sbjct: 121 TALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRTDQLIDDIRFLSKGFYQFQGN 180

Query: 177 FWDSVEDVASYTLGGKTFHKLDRAPFD--PTFLNQYVIDEDSDFAARVESIDGDKLTLRD 234
           FW+ +  V++   G  T H++     D  P ++NQY+ID +SDF  RV       L + D
Sbjct: 181 FWEHLNKVSTERHGRHTIHEVPLKDLDNEPFYINQYLIDTESDFCGRVTERSDTHLHILD 240

Query: 235 LSRERMMHRKAWGITPKNIYQGMALDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTVE 294
           L RER+ + +AWG+ PKN+YQGMAL ALLDPDIDLVILTG AG GKTLLAMAAALE  VE
Sbjct: 241 LGRERLKNLEAWGVKPKNVYQGMALQALLDPDIDLVILTGPAGCGKTLLAMAAALELVVE 300

Query: 295 RKMFDKIIVTRNTPDIGESIGFLPGTEEEKMMPWLASVTDTLEALHKNDHCTDGSLKYIC 354
           R  +DK+IVTRNTP+I ESIGFLPGTEEEKMMPWLA++TDTLE LHKND    GSL YI 
Sbjct: 301 RNRYDKVIVTRNTPEIAESIGFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIM 360

Query: 355 DKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCSGNLAQIDS 414
           DKANIQFKSINFMRGRSIQN+ VLLDECQNLTASQIKT+ITR GEGTK++C GNLAQIDS
Sbjct: 361 DKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMITRMGEGTKLICCGNLAQIDS 420

Query: 415 HYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENL 458
           +YLT VTSGLTY+VERFK+FEGSAN++LNGVVRSRLAE+AEE+L
Sbjct: 421 NYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL 464