Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 6/129 (4%)

Query: 496 LLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQE 555
           L E +  K  +++LV ++      +L + L   +GI + V H   +   R +A   F   
Sbjct: 235 LSELIGRKNWQRVLVFSATREDCEKLTEELN-LDGIPSAVIHSEKAQGTRRRALKDFT-- 291

Query: 556 EGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDVYVPYL 615
           EG  +VL+ +E+ + G +      +V FDLPF P+    R+GR  R G+     V + ++
Sbjct: 292 EGKIRVLVSTEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKS---GVAISFV 348

Query: 616 TETSQAILA 624
           +   +  LA
Sbjct: 349 SREEERTLA 357