Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., ATP-dependent RNA helicase DeaD (RefSeq) from Shewanella amazonensis SB2B

 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 25/114 (21%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 491 SRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAA 550
           +++  L+  ++ + +E I++     ++ ++L + L  R G  A+  H  M+   R++A  
Sbjct: 231 NKLEALVRVLEVENTEGIIIFVRTRNSCMELAEKLEAR-GYAASPLHGDMNQQARERAVD 289

Query: 551 YFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQ 604
               + G   +LI +++ + G + +    +V +D+P++ +    RIGR  R G+
Sbjct: 290 QL--KSGKLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGR 341