Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., DEAD/DEAH box helicase from Parabacteroides merdae CL09T00C40

 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 10/137 (7%)

Query: 492 RVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAY 551
           ++N L   ++ +  E +LV       A ++ + L  + GI A   H       R +A + 
Sbjct: 231 KINLLKNLLEDRSLESVLVFTRTKHGADKVARVLN-KSGIGAEAIHGNKGQSARQRALSS 289

Query: 552 FAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKR----- 606
           F  ++   +VLI ++I S G +    + ++ +DLP  P+    RIGR  R G+       
Sbjct: 290 F--KDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSF 347

Query: 607 -DIDVYVPYLTETSQAI 622
            D++  VPYL +  + I
Sbjct: 348 CDVE-EVPYLKDIQKLI 363