Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 496 LLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQE 555
           LL K+ +K +   LV  +   T  ++   L E  G+   VFH GM   +R+KA   F   
Sbjct: 219 LLSKIGSKNT---LVFCNHRETVDRISDLLFEN-GLGHDVFHGGMEQFDREKALLKF--R 272

Query: 556 EGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQK 605
            G  ++LI +++ + G +      +V + LP+  D    R GR  R+  K
Sbjct: 273 NGSHRILITTDLAARGLDIPEVEHIVHYQLPYTEDAYIHRNGRTARMHAK 322