Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

 Score = 48.1 bits (113), Expect = 1e-09
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 473 EEIFQEFEGEESSWWQFDSRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIR 532
           + +FQ  +G + +     + V+ L ++     S + +V  +      +L + L EREGI 
Sbjct: 236 QTVFQVEDGHKQA-----AVVHLLKKRAAEGLSRQCIVFVNSKIGCSRLARHL-EREGIN 289

Query: 533 ATVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLL 592
           A   H   +  ER +    F Q  G    L+ +++ + G +      ++ FDLPF+ +  
Sbjct: 290 AAAIHGDKTQTERMQTLDGFKQ--GNIDALVATDVAARGLDIPDMPCVINFDLPFSAEDY 347

Query: 593 EQRIGRLDRIGQKRD-IDVYVP 613
             RIGR  R G   D + +YVP
Sbjct: 348 VHRIGRTGRAGASGDALSIYVP 369