Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Superfamily II DNA and RNA helicase from Paraburkholderia bryophila 376MFSha3.1

 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 496 LLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQE 555
           +++ ++ +  ++++V  +    A +L ++L ER+G+ AT  H   S  ER +A   F  +
Sbjct: 248 VVQLIRERGLKQVIVFCNSKIGASRLARSL-ERDGVVATAIHGDRSQNERMQALDAF--K 304

Query: 556 EGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRD 607
            G  + L+ +++ + G +      ++ FDLPFN +    RIGR  R G   D
Sbjct: 305 RGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGD 356