Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score =  101 bits (252), Expect = 2e-26
 Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 29/228 (12%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYD-SMWARLVDYCPDV------KVVHRLDMS 66
           ++++YED+ I+  +KP+GL+  P     H D ++   L+ + P +       +VHRLD  
Sbjct: 138 LEIVYEDDQILVIDKPAGLVVHPA--AGHADGTLLNALLHHVPGLINVPRAGIVHRLDKD 195

Query: 67  TSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQK 126
           T+GL++ AK    ++ L +Q Q R   +IY A V GV+    G ++ P+      R +  
Sbjct: 196 TTGLMVVAKTLQAQTRLVEQLQARSVSRIYEAIVIGVIITG-GTIDAPIGRHGQQRQRMA 254

Query: 127 VCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYA----- 181
           V  E G+ +++ Y+V++R    T VR+   TGR+HQ+RVHM  LG+P+VGD LYA     
Sbjct: 255 VV-EGGKPAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMPHLGYPLVGDPLYAGRFRI 313

Query: 182 PPEA-------VEFADRLQLHAAELCFYHP----RSHWLRTLFVPCDF 218
           PP A       +    R  LHA  L   HP    R  W   L  P DF
Sbjct: 314 PPAANPTLVQTLREFPRQALHARFLELDHPVTGQRMKWESPL--PDDF 359