Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score =  164 bits (415), Expect = 1e-45
 Identities = 86/194 (44%), Positives = 126/194 (64%), Gaps = 1/194 (0%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-CPDVKVVHRLDMSTSGLIL 72
           I+++++D  ++  NKP+ LLSVPGR  ++ D +  RL +   P+ ++VHRLD  TSGLI+
Sbjct: 6   IEIVHQDAALLVINKPTLLLSVPGRAEDNRDCLVTRLQENGYPEARIVHRLDWETSGLIV 65

Query: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132
            A+       L +QF  R T K Y A  WG  EQ+ G ++LPL  D P +P+  V  E G
Sbjct: 66  LARDADTHRELSRQFHDRETEKAYTALCWGEPEQDSGSIDLPLRYDPPTKPRHVVDHELG 125

Query: 133 RDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFADRL 192
           + +LT ++V++R    + V L PITGRSHQLRVHM S+GHP++GD LYA  +A++  +RL
Sbjct: 126 KHALTFWRVLERCGDYSRVELTPITGRSHQLRVHMLSIGHPLLGDRLYAHEQALQAHERL 185

Query: 193 QLHAAELCFYHPRS 206
            LHA+ L   HP++
Sbjct: 186 CLHASMLTLTHPQT 199