Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 12/194 (6%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVK---VVHRLDMSTSGLIL 72
           ++YED+ +I  NKP+G+    G  + +   +   L    PD K   +VHRLD  TSGL++
Sbjct: 97  IVYEDKALIVLNKPAGIAVHGGSGLSY--GVIEALRQLRPDAKELELVHRLDRDTSGLLM 154

Query: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKV-CFEE 131
            AK + M   L +  +     K Y A V G  E ++ +VN PL  +     ++ V   E+
Sbjct: 155 VAKKRSMLRHLHQALRGDGVDKRYMALVRGRWETSKKQVNAPLLKNTLRSGERMVEVTED 214

Query: 132 GRDSLTRYQVVKR-EEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVE--- 187
           G+++LT + V++R  E  T+V   P+TGR+HQ+RVH +  GH I GD  Y   E      
Sbjct: 215 GKEALTLFHVLRRFGEFATLVEAKPVTGRTHQIRVHARHAGHSIAGDSKYGDEEFTREIR 274

Query: 188 --FADRLQLHAAEL 199
                RL LHA  L
Sbjct: 275 ELGGKRLFLHAYAL 288