Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., ribosomal large subunit pseudouridine synthase A from Pseudomonas syringae pv. syringae B728a

 Score =  164 bits (416), Expect = 1e-45
 Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 1/192 (0%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-CPDVKVVHRLDMSTSGLIL 72
           I +I++D  ++  +KP+ LLSVPGR  ++ D +  RL +   P+ ++VHRLD  TSG+IL
Sbjct: 6   IRIIHQDAAVLVIDKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65

Query: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132
            A+       L +QF  R T K Y A  WG    + G ++LPL  D P +P+  V  E G
Sbjct: 66  LARDADTHRELSRQFHDRETEKAYTALCWGQPSLDSGSIDLPLRYDPPTKPRHVVDHEGG 125

Query: 133 RDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFADRL 192
           + +LT ++VV+R +    V L PITGRSHQLRVHM S+GHP++GD LYA PEA+    RL
Sbjct: 126 KHALTFWKVVERHDTYCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHPEALAAYPRL 185

Query: 193 QLHAAELCFYHP 204
            LHA+ L F HP
Sbjct: 186 CLHASMLSFTHP 197