Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 2e-28
 Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 7/214 (3%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHY-DSMWARLVDYCPDVKVVHRLDMSTSGLILFA 74
           +++ED H+I  NK +GL    G    H+ D M   L D     ++VHRLD  TSG+++ A
Sbjct: 96  ILHEDAHLIVINKEAGLAVQGGTGTPHHLDGMLESLADGGETPRLVHRLDKDTSGVLVLA 155

Query: 75  KGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNR-PKQKVCFEEGR 133
           + +    AL   F+ R   K+Y+A V G     +G +   L      R  + ++  EEG+
Sbjct: 156 RTQAAARALTSAFRSREALKVYWAIVVGRPPMLQGTIKGALAKVAGGRGERMEINEEEGK 215

Query: 134 DSLTRYQVVKREEKTTV-VRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPP----EAVEF 188
            ++T ++VV +  K    V L P TGR+HQLRVH   +G PI+GD  Y  P    E  E 
Sbjct: 216 RAVTDFRVVDQAAKACAWVELHPRTGRTHQLRVHCLEMGTPILGDGKYGGPGAFLEGTEL 275

Query: 189 ADRLQLHAAELCFYHPRSHWLRTLFVPCDFYPEA 222
             R+ LHA  L   HP    L  +  P   + E+
Sbjct: 276 PKRMHLHARALALPHPAGGVLEIIAPPPPHFVES 309