Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., RluA family pseudouridine synthase from Rahnella sp. WP5

 Score =  152 bits (383), Expect = 7e-42
 Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 11/210 (5%)

Query: 8   PPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDMST 67
           PP    I+ +Y+DEH+   NKP+GLLS+ G+  ++ DS+  RLV   P   +VHRLD  T
Sbjct: 11  PPCHGQIETLYQDEHLALINKPTGLLSLSGKNPQNLDSVHHRLVKIFPGCTLVHRLDFGT 70

Query: 68  SGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKV 127
           SGL++ A+ K + +AL  QF  R   K+Y A + G ++ NEG  + P+  D    P   +
Sbjct: 71  SGLMVIARNKAINAALCHQFSQRTVTKVYSALLCGHLQHNEGVTDAPIAKDPALFPLMSI 130

Query: 128 CFEEGRDSLTRYQVVK---REEKT------TVVRLIPITGRSHQLRVHMQSLGHPIVGDD 178
           C   G+ + + Y+VV+   RE++       T V L P TGR+HQLR+H Q LGHPI+G D
Sbjct: 131 CAVHGKPARSGYRVVERFYREQENGELLPLTRVLLTPQTGRTHQLRIHCQYLGHPILGCD 190

Query: 179 LYAPP--EAVEFADRLQLHAAELCFYHPRS 206
           LY        E   RL LHA+EL F HP S
Sbjct: 191 LYGGRLLPGTEQTPRLMLHASELHFVHPVS 220