Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., RluA family pseudouridine synthase from Rhodopseudomonas palustris CGA009

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 70/200 (35%), Positives = 100/200 (50%), Gaps = 11/200 (5%)

Query: 17  IYEDEHIIAANKPSGLLSVPGR-PVEHYDSMWARLVDYCPDV-KVVHRLDMSTSGLILFA 74
           ++ED  ++  NKP+GL    G     H D M   L D      ++VHR+D  T+G +L A
Sbjct: 219 LFEDADVLVLNKPAGLAVQGGSGTTRHIDQMLEVLRDSKGQKPRLVHRIDKETAGCLLVA 278

Query: 75  KGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEGRD 134
           K +   +AL   F++R   KIY+A V GV +  +G ++  L  D           + G D
Sbjct: 279 KTRFAATALTGSFRHRSARKIYWALVAGVPKPKQGRISTYLAKDESEEDSIMRVAKHGDD 338

Query: 135 ----SLTRYQVVKRE-EKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVE-- 187
               ++T Y VV+   +K   V L P+TGR+HQLR HM  +GH IVGD  Y   E  +  
Sbjct: 339 GASHAVTYYAVVETSGQKLAWVSLKPVTGRTHQLRAHMAHIGHAIVGDPKYFNIENWQLP 398

Query: 188 --FADRLQLHAAELCFYHPR 205
               +RL L A  +   HPR
Sbjct: 399 GGLQNRLHLLARRIVIPHPR 418