Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., RluA family pseudouridine synthase from Parabacteroides merdae CL09T00C40

 Score =  147 bits (371), Expect = 4e-40
 Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 13/203 (6%)

Query: 10  KDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVK---VVHRLDMS 66
           +D  ++++YEDE +   NKP+G+LSVPG+     DS++ R+    P+     +VHRLDM+
Sbjct: 333 RDTELEIMYEDEWLSVVNKPAGMLSVPGK--SDIDSVYGRVRRMYPEATGPMIVHRLDMA 390

Query: 67  TSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQK 126
           TSGLIL AK K +   L+ QF+ R   K Y A + G++E+ EG + LPL  D  +RP+Q 
Sbjct: 391 TSGLILIAKTKEVHQNLQAQFKNRTVCKRYVAWLDGIVEKKEGHIELPLRPDPEDRPRQV 450

Query: 127 VCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQ---SLGHPIVGDDLYAPP 183
           V    G+ ++T Y V+  +   T +  IP TGR+HQLRVH      L  PIVGD+LY   
Sbjct: 451 VDAVHGKPAVTDYTVLHYDSGRTFISFIPKTGRTHQLRVHSAHPLGLNAPIVGDELYG-- 508

Query: 184 EAVEFADRLQLHAAELCFYHPRS 206
                ADRL LHA  L F HP S
Sbjct: 509 ---RKADRLYLHAEYLGFIHPVS 528