Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  112 bits (281), Expect = 8e-30
 Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 17/207 (8%)

Query: 9   PKDPWIDVIYEDEHIIAANKPSGLLSVPG---------RPVEHYDSMWARLVDYCPDVKV 59
           P+D    V+YEDE I+  NKP+GL+  PG           + H+    A++    P   +
Sbjct: 97  PEDIPFPVVYEDEAILIINKPAGLVVHPGSGNWSGTLLNALLHHTPQLAQV----PRAGI 152

Query: 60  VHRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDW 119
           VHRLD  TSGL++ AK    ++ L +Q Q R   + Y A + G + +N G V+ P+    
Sbjct: 153 VHRLDKDTSGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVGYLNRN-GTVDAPIGRHP 211

Query: 120 PNRPKQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDL 179
             R K  V    GR++ T Y V++  E+ T+V+    TGR+HQ+RVHM +LG P+VGD +
Sbjct: 212 TQRTKMAVVQHNGREARTHYTVLEHFERCTLVQCRLETGRTHQIRVHMAALGFPLVGDAV 271

Query: 180 Y--APPEAVEFADRLQLHAAELCFYHP 204
           Y       V F  R  LHA  L   HP
Sbjct: 272 YNKGKTAGVRF-PRQALHAYRLGLIHP 297